Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939074.1_cds_XP_016483770.1_74853
CDS Infomation

[gene=LOC107804400] [db_xref=GeneID:107804400] [protein=histone-lysine N-methyltransferase setd3-like] [protein_id=XP_016483770.1] [location=complement(join(26740..26907,26988..27089,27682..27801,27881..27967,28040..28124,29650..29804,29905..29997,30112..30198,30277..30482,31179..31254,31379..31738))] [gbkey=CDS]
Sequence

ATGATGGACTTGGCTTATTCACCAATGGCCAAATGCATTTCGACGCCATTTCAATCTTTC
ACTCATCGACCACTAGCACTTTTTTCTAGGGTTTCCATTTCGGTACACATTAAGCCCAAA
TTTGCAAATACTTATCGTCGGTGGAACATGTGTTCTGCTTCCAGCTCGGATACACATACA
CTTGTCGCTGGGCATAAATCTGTTGAAGTTGAAAGTAACAAAGAGGATGAATACGGGGAC
TTAAAATCATGGATGCACGAAAATGGGCTACCTCCTTGCAAAGTGGTTATTAAGGAAAGG
CCTTCCCATAATGCTAAACATCGGCCCATTCACTATGTTGCTGCCAGTGAGGATCTTCAG
GCTGGTGATATTGCTTTTTCTGTTCCGGATTCGTTGGTGGTAACGCTTGAGAGAGTTTTG
GGAAATGAGAGCATTGCTGAACTCTTGACAACAAACAAATTGTCTGAACTAGCCTGCTTA
GCGCTTTATCTAATGTATGAGAAGAAACAAGGAAAGAAGTCGTTCTGGTACCCTTATATA
AAAGAACTCGATCGCCAGCGGGCAAGGGGCCAGCTAGCTGTGGAATCGCCTCTTCTATGG
TCAGACGCTGAACTAGATTACCTGACAGGGAGTCCTACTAAGGCTGAAGTTTTGGAAAGG
GCTGAAGGGATCAAGAGAGAGTACAATGAGCTTGATACAGTCTGGTTCATGGCTGGATCT
CTGTTTCAGCAATACCCCTATGATATACCCACTGATGCATTTCCGTTTGAGATCTTCAAG
CAAGCTTTTGTTGCAGTGCAATCATGTGTTGTACATTTACAGAAAGTTAGTCTTGCCCGG
AGGTTTGCACTAGTCCCATTGGGACCACCATTATTATCCTATTGTAGCAACTGCAGAGCA
ATGTTAGCAGCAGTTAATGGTGCAGTGCAACTGGTTGTCGACCGCTCTTATAGGGCAGGA
GATCCAATTGTTGTGTGGTGTGGACCACAACCTAATTCAAAGTTACTCATTAACTATGGT
TTTGTTGATGAAGAAAATTCGTACGACCGTCTTATGGTGGAGGCAGCATTAAATACAGAG
GATCCTCAATATCAAGACAAGCGTCTAGCTGCTCAAAGGAATGGTAAACTATCAGTGCAA
GCTTTCCAGGTGTGTGTGGGAAAAGAAAGAGAGGCTGTGTTGGAGATGCTTCCTTATTTG
AGATTGGGATATGTTTCAGATCCTTCAGAAATGCAGACGGTCTTATCATCTCAAGGCCCT
ATTTGTCTGGTGAGCCCTTGTATGGAAAGAGCAGTTCTGGGTCAGCTAAGTGATTATTTC
GAGGCAAGGCTGGCTAGTTATCCGACCACTCTAAGTGAAGATGAGGCTTTGTTGGCTGAT
GCTGATCTGGATCCAAAAAAGCGAGTTGCTACACAGCTTGTCAGGTTGGAAAAGAAAATT
CTAAATGCATGCCTGGAAACTACAGTGAACTTCATTAATCAATTACCTGATCTCTCCGTA
TCTCCATGTCCGGCTCCTTTTGCTCCAACATTGAAATGA

Peptide Sequence

PEP ID

XP_016483770.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase setd3-like [Nicotiana tabacum]
Sequence

MMDLAYSPMAKCISTPFQSFTHRPLALFSRVSISVHIKPKFANTYRRWNMCSASSSDTHT
LVAGHKSVEVESNKEDEYGDLKSWMHENGLPPCKVVIKERPSHNAKHRPIHYVAASEDLQ
AGDIAFSVPDSLVVTLERVLGNESIAELLTTNKLSELACLALYLMYEKKQGKKSFWYPYI
KELDRQRARGQLAVESPLLWSDAELDYLTGSPTKAEVLERAEGIKREYNELDTVWFMAGS
LFQQYPYDIPTDAFPFEIFKQAFVAVQSCVVHLQKVSLARRFALVPLGPPLLSYCSNCRA
MLAAVNGAVQLVVDRSYRAGDPIVVWCGPQPNSKLLINYGFVDEENSYDRLMVEAALNTE
DPQYQDKRLAAQRNGKLSVQAFQVCVGKEREAVLEMLPYLRLGYVSDPSEMQTVLSSQGP
ICLVSPCMERAVLGQLSDYFEARLASYPTTLSEDEALLADADLDPKKRVATQLVRLEKKI
LNACLETTVNFINQLPDLSVSPCPAPFAPTLK

Transcript Sequence

Gene sequence data has not been registered.